BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F05SP1|AL427930
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig307 458 e-128
>3x_Contig307
Length = 1772
Score = 458 bits (230), Expect = e-128
Identities = 246/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Plus
Query: 3 ctttttgggaatwtttcaaagcttcacggaaacgaaataatagaggaagtcttctatttg 62
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 ctttttgggaatttttcaaagcttcacggaaacgaaataatagaggaagtcttctatttg 1475
Query: 63 cctgaaccatcagtgtttgtgaagaaatctgaagatacaattaaaataaaaakctcatcg 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1476 cctgaaccatcagtgtttgtgaagaaatctgaagatacaattaaaataaaaagctcatcg 1535
Query: 123 tgttatttcacggaatatttaaatctgaaacccaaccgtggggtaaaaaatttcagggcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 tgttatttcacggaatatttaaatctgaaacccaaccgtggggtaaaaaatttcagggcc 1595
Query: 183 ctagtgctaaccactgaggcaaaaaatgattgcatgtcttt-cgtatcacaaatgtc-tc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 1596 ctagtgctaaccactgaggcaaaaaatgattgcatgtctttccgtatcacaaatgtcatc 1655
Query: 241 agacatattc 250
||||||||||
Sbjct: 1656 agacatattc 1665
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6470
Number of Sequences: 1807
Number of extensions: 6470
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)